A smart & free taxonomy tree generator online
To cite iPhylo in publications use:
Li, Y., Peng, C., Chi, F., Huang, Z., Yuan, M., Zhou, X., & Jiang, C. The iPhylo suite: an interactive platform for building and annotating biological and chemical taxonomic trees. Briefings in Bioinformatics, 26(1). https://doi.org/10.1093/bib/bbae679
| NCBI taxonomy version | 2023.4 |
|---|---|
| iPhylo database version | 2023.4 |
| Biological taxonomy nodes | 2,388,300 |
| Chemical taxonomy nodes | 801,308 |
- iPhylo CLI: A command line interface for generating biological and chemical taxonomy trees, providing an expanded database and customized trees. Applies to MacOS, Windows, and Linux.
- iPhylo Visual: Visualization and annotation tool for iPhylo tree and other tree structures.
ViroDecode: An optimized workflow for SNP calling and genome assembly tailored to ultra-deep sequencing and amplicon sequencing data, with a specific focus on SARS-CoV-2.
Kun-peng: An ultra-memory-efficient, fast, and accurate pan-domain taxonomic classifier for all.
ReporterScore: Generalized reporter score-based enrichment analysis for omics data. View Publication
Hope you like our services. We welcome you to contact us if you have any problems in using iPhylo!
